STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)    
Predicted Functional Partners:
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.996
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.966
BUD31
BUD31 homolog.
    
 
 0.964
CDC40
Cell division cycle 40.
   
 0.952
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.940
DHX32
DEAH-box helicase 32 (putative).
   
 0.923
DQX1
ATP-dependent RNA helicase DQX1.
   
 0.923
XAB2
Pre-mRNA-splicing factor SYF1.
   
 
 0.916
WDR25
WD repeat domain 25.
   
 0.909
SYF2
Pre-mRNA-splicing factor SYF2 isoform 1.
    
  0.909
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.