STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRACT cell receptor alpha constant. (138 aa)    
Predicted Functional Partners:
B2M
Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).
    
 0.935
CAJA-DRA
HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.
    
  0.795
LOC108591149
Ig-like domain-containing protein.
   
  0.791
ENSCJAP00000076100
Ig-like domain-containing protein.
   
  0.791
Caja-DQB1
Ig-like domain-containing protein.
   
  0.791
H9KWK7_CALJA
MHC_I-like_Ag-recog domain-containing protein; Belongs to the MHC class I family.
    
  0.789
ENSCJAP00000078241
Ig-like domain-containing protein; Belongs to the MHC class I family.
    
  0.789
Caja-DQA1
Ig-like domain-containing protein; Belongs to the MHC class II family.
    
  0.773
RPA2
RPA_C domain-containing protein.
    
  0.767
ENSCJAP00000073535
RPA_C domain-containing protein.
    
  0.767
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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