STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118BFamily with sequence similarity 118 member B. (351 aa)    
Predicted Functional Partners:
C11orf95
Chromosome 11 open reading frame 95.
   
 0.683
MAMLD1
Mastermind like domain containing 1.
    
 0.578
RHBDD3
Rhomboid domain-containing protein 3.
    
 
 0.499
INTS4
Integrator complex subunit 4.
    
 
 0.459
BBS9
Protein PTHB1 isoform 2.
    
 0.458
ENSCJAP00000067149
Uncharacterized protein.
    
 0.432
ENSCJAP00000069046
J domain-containing protein.
    
 0.432
NUTM1
NUT midline carcinoma family member 1.
    
 0.420
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.