STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHDC4Kelch domain containing 4. (522 aa)    
Predicted Functional Partners:
UTP6
U3 small nucleolar RNA-associated protein 6 homolog.
   
    0.564
CEBPZ
CCAAT/enhancer-binding protein zeta.
   
    0.552
RBM28
RNA-binding protein 28 isoform 1.
   
    0.489
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
    0.487
RPF2
Ribosome production factor 2 homolog.
   
    0.487
ARMC6
Armadillo repeat containing 6.
      
 0.476
WDR74
WD repeat-containing protein 74.
   
    0.471
PWP2
Uncharacterized protein.
   
    0.455
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.443
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
    0.435
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.