STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT4ATerminal nucleotidyltransferase 4A. (793 aa)    
Predicted Functional Partners:
ZCCHC7
Zinc finger CCHC domain-containing protein 7.
   
 
 0.896
MTREX
Superkiller viralicidic activity 2-like 2.
   
 
 0.867
EXOSC10
Exosome component 10.
   
 
 0.758
CNOT9
Uncharacterized protein.
    
   0.723
ZCCHC14
Zinc finger CCHC-type containing 14.
   
 
 0.723
POLL
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
   
  
 0.637
SCAF4
Splicing factor, arginine/serine-rich 15 isoform 1.
    
 
 0.629
SCAF8
SR-related CTD associated factor 8.
    
 
 0.629
SKIV2L
Ski2 like RNA helicase.
   
 
 0.618
ZCCHC8
Zinc finger CCHC-type containing 8.
     
 0.585
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (12%) [HD]