STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain-containing protein 1. (531 aa)    
Predicted Functional Partners:
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
 
 0.806
STARD3NL
MLN64 N-terminal domain homolog.
      
 0.801
NSA2
Ribosome biogenesis protein NSA2 homolog isoform 1.
   
  
 0.781
PPP2CA
Serine/threonine-protein phosphatase.
    
 
 0.704
ZC3H11A
Zinc finger CCCH domain-containing protein 11A.
   
  
 0.689
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
    
 0.629
RANBP2
RAN binding protein 2.
   
 0.593
PIK3R2
Phosphatidylinositol 3-kinase regulatory subunit beta.
    
 
 0.592
CCDC106
Coiled-coil domain containing 106.
      
 0.577
NDUFAF7
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
      
 0.568
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.