STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCBTB1RCC1 and BTB domain-containing protein 1. (531 aa)    
Predicted Functional Partners:
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
    
 0.838
RCBTB2
RCC1 and BTB domain containing protein 2.
   
   0.785
ACTR8
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.776
NUDCD2
NudC domain-containing protein 2.
    
  0.775
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
      
 0.770
OGFRL1
Opioid growth factor receptor like 1.
   
 0.749
ABCB7
ATP binding cassette subfamily B member 7.
   
  
 0.744
DOK4
Docking protein 4.
      
 0.742
NUDCD1
NudC domain-containing protein 1 isoform 1.
    
   0.733
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.733
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.