STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUBNCubilin. (3508 aa)    
Predicted Functional Partners:
AMN
Amnion associated transmembrane protein.
   
 0.948
TCN1
Transcobalamin 1.
   
 0.922
ENSCJAP00000054460
Uncharacterized protein.
 
     0.919
CBLIF
Cobalamin binding intrinsic factor.
   
 0.903
GC
GC vitamin D binding protein.
    
 0.849
LRP2
LDL receptor related protein 2.
   
 0.700
ALB
Albumin.
      
 0.683
ISLR
Immunoglobulin superfamily containing leucine rich repeat.
   
  
 0.593
PI15
Peptidase inhibitor 15 preproprotein; Belongs to the CRISP family.
      
 0.581
SLC34A3
Solute carrier family 34 member 3.
   
  
 0.579
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.