STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM46Tripartite motif-containing protein 46 isoform 1. (759 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.637
KRTCAP2
Keratinocyte associated protein 2.
      
 0.614
CAMSAP2
Calmodulin regulated spectrin associated protein family member 2.
   
 
 0.587
TRIM37
Tripartite motif containing 37.
      
 0.585
THBS3
Thrombospondin-3 isoform 1.
    
 0.580
TRIM23
E3 ubiquitin-protein ligase TRIM23 isoform alpha.
    
 0.566
RNF207
Ring finger protein 207.
      
 0.562
MAP7D2
MAP7 domain containing 2.
   
 
 0.562
TRIM32
E3 ubiquitin-protein ligase TRIM32.
      
 0.560
MTX1
Metaxin 1.
      
 0.556
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.