VCP protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DERL1	NPLOC4	ENSCJAP00000058143	ENSCJAP00000002844	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Nuclear protein localization protein 4 homolog.	0.794
DERL1	NSFL1C	ENSCJAP00000058143	ENSCJAP00000038938	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	NSFL1 cofactor p47 isoform d.	0.725
DERL1	UBXN1	ENSCJAP00000058143	ENSCJAP00000034888	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	UBX domain protein 1.	0.957
DERL1	UBXN2A	ENSCJAP00000058143	ENSCJAP00000014239	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	UBX domain-containing protein 2A.	0.548
DERL1	UBXN8	ENSCJAP00000058143	ENSCJAP00000054806	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	UBX domain-containing protein 8.	0.491
DERL1	UFD1	ENSCJAP00000058143	ENSCJAP00000060765	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Uncharacterized protein.	0.927
DERL1	VCP	ENSCJAP00000058143	ENSCJAP00000016575	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.988
DERL1	YOD1	ENSCJAP00000058143	ENSCJAP00000034210	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	YOD1 deubiquitinase.	0.506
NPLOC4	DERL1	ENSCJAP00000002844	ENSCJAP00000058143	Nuclear protein localization protein 4 homolog.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.794
NPLOC4	NSFL1C	ENSCJAP00000002844	ENSCJAP00000038938	Nuclear protein localization protein 4 homolog.	NSFL1 cofactor p47 isoform d.	0.954
NPLOC4	UBXN1	ENSCJAP00000002844	ENSCJAP00000034888	Nuclear protein localization protein 4 homolog.	UBX domain protein 1.	0.921
NPLOC4	UBXN2A	ENSCJAP00000002844	ENSCJAP00000014239	Nuclear protein localization protein 4 homolog.	UBX domain-containing protein 2A.	0.663
NPLOC4	UBXN6	ENSCJAP00000002844	ENSCJAP00000013840	Nuclear protein localization protein 4 homolog.	UBX domain protein 6.	0.869
NPLOC4	UBXN8	ENSCJAP00000002844	ENSCJAP00000054806	Nuclear protein localization protein 4 homolog.	UBX domain-containing protein 8.	0.669
NPLOC4	UFD1	ENSCJAP00000002844	ENSCJAP00000060765	Nuclear protein localization protein 4 homolog.	Uncharacterized protein.	0.999
NPLOC4	VCP	ENSCJAP00000002844	ENSCJAP00000016575	Nuclear protein localization protein 4 homolog.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.998
NPLOC4	YOD1	ENSCJAP00000002844	ENSCJAP00000034210	Nuclear protein localization protein 4 homolog.	YOD1 deubiquitinase.	0.730
NSFL1C	DERL1	ENSCJAP00000038938	ENSCJAP00000058143	NSFL1 cofactor p47 isoform d.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.725
NSFL1C	NPLOC4	ENSCJAP00000038938	ENSCJAP00000002844	NSFL1 cofactor p47 isoform d.	Nuclear protein localization protein 4 homolog.	0.954
NSFL1C	UBXN1	ENSCJAP00000038938	ENSCJAP00000034888	NSFL1 cofactor p47 isoform d.	UBX domain protein 1.	0.960