STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP31Rho GTPase activating protein 31. (1447 aa)    
Predicted Functional Partners:
ITSN1
Intersectin 1.
    
 0.781
SH3RF3
SH3 domain containing ring finger 3.
   
  
 0.695
RCBTB1
RCC1 and BTB domain-containing protein 1.
      
 0.692
ZNF408
Zinc finger protein 408.
      
 0.682
TSPAN12
Tetraspanin.
      
 0.660
RHOU
Rho-related GTP-binding protein RhoU.
   
 0.649
CDC42
Cell division control protein 42 homolog isoform 1.
   
 0.642
ENSCJAP00000069652
Uncharacterized protein.
   
 0.642
ENSCJAP00000073331
Uncharacterized protein.
   
 0.642
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.627
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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