STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC60Coiled-coil domain containing 60. (550 aa)    
Predicted Functional Partners:
EPS8L2
SH3 domain-containing protein.
      
 0.565
SYTL1
Synaptotagmin like 1.
      
 0.564
UBXN11
UBX domain protein 11.
      
 0.554
TEX9
Testis expressed 9.
      
 0.522
FRMD8
FERM domain containing 8.
      
 0.487
RABL2B
Rab-like protein 2B isoform 1.
      
 0.475
GLOD4
Glyoxalase domain-containing protein 4.
      
 0.473
PKN3
Serine/threonine-protein kinase N3.
      
 0.446
FAM178B
Family with sequence similarity 178 member B.
      
 0.404
HSF2
Heat shock factor protein 2 isoform a.
      
 0.400
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.