Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGA8Integrin subunit alpha 8; Belongs to the integrin alpha chain family. (1063 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.997
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.985
FN1
Fibronectin isoform 1 preproprotein.
    
 0.978
VTN
SMB domain-containing protein.
   
 0.975
TNC
Tenascin C.
    
 0.965
TNR
Tenascin-R.
    
 0.943
ITGB6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.943
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.941
TNN
Tenascin N.
    
 0.941
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.934
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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