STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROPN1LRhophilin associated tail protein 1 like. (230 aa)    
Predicted Functional Partners:
FAM71D
Family with sequence similarity 71 member D.
   
  
 0.820
MNS1
Meiosis-specific nuclear structural protein 1.
    
 
 0.741
CAPS
Calcyphosin isoform a.
   
  
 0.728
SLC9B1
Solute carrier family 9 member B1.
      
 0.723
RSPH1
Radial spoke head component 1.
   
 
 0.715
CFAP53
Cilia and flagella associated protein 53.
   
 
 0.711
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
      
 0.700
WBP2NL
Postacrosomal sheath WW domain-binding protein.
      
 0.698
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.668
PIFO
Primary cilia formation.
   
  
 0.638
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.