STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROPN1LRhophilin associated tail protein 1 like. (230 aa)    
Predicted Functional Partners:
SLC9B1
Solute carrier family 9 member B1.
      
 0.789
FAM71D
Family with sequence similarity 71 member D.
   
  
 0.787
SPATA16
Spermatogenesis associated 16.
   
  
 0.724
PLCZ1
Phosphoinositide phospholipase C.
      
 0.701
MNS1
Meiosis-specific nuclear structural protein 1.
      
 0.661
ANKRD7
Ankyrin repeat domain 7.
   
 
 0.648
CTSG
Cathepsin G; Belongs to the peptidase S1 family.
      
 0.646
MPO
Myeloperoxidase.
      
 0.646
PRMT8
Protein arginine N-methyltransferase 8 isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
      
 0.646
ELANE
Elastase, neutrophil expressed; Belongs to the peptidase S1 family.
      
 0.646
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.