STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB20Zinc finger and BTB domain containing 20. (741 aa)    
Predicted Functional Partners:
SOX5
SRY-box transcription factor 5.
    
 
 0.698
PVALB
Parvalbumin alpha; Belongs to the parvalbumin family.
    
 0.644
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.628
ZHX2
Zinc fingers and homeoboxes protein 2.
    
 
 0.599
CALB1
Calbindin 1.
    
 0.575
GRB14
Growth factor receptor bound protein 14.
    
 0.569
SATB2
DNA-binding protein SATB.
    
 
 0.550
NDST4
N-deacetylase and N-sulfotransferase 4.
      
 0.543
DCX
Doublecortin.
      
 0.537
FKTN
Fukutin isoform a.
   
 0.522
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.