STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTFR1Mitochondrial fission regulator 1. (332 aa)    
Predicted Functional Partners:
BPIFA2
BPI fold containing family A member 2.
   
   0.787
AMELX
Amelogenin X-linked.
   
    0.784
RASA1
RAS p21 protein activator 1.
   
    0.782
TEC
Tyrosine-protein kinase.
    
 0.702
CPQ
Carboxypeptidase Q.
     
 0.688
GHRH
Growth hormone releasing hormone.
   
    0.634
EPHA8
EPH receptor A8.
    
 0.611
ANLN
Anillin actin binding protein.
   
 
 0.605
GEMIN5
Gem nuclear organelle associated protein 5.
   
  
 0.597
CSDE1
Cold shock domain containing E1.
   
 0.572
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.