Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (428 aa)    
Predicted Functional Partners:
RAD1
RAD1 checkpoint DNA exonuclease.
    
 0.994
HUS1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.989
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.983
RAD9A
Cell cycle checkpoint control protein; Belongs to the rad9 family.
  
  
0.945
TOPBP1
DNA topoisomerase II binding protein 1.
    
 0.930
RAD17
Cell cycle checkpoint protein RAD17 isoform 2.
   
 0.922
WRN
WRN RecQ like helicase.
   
 0.898
RFC4
Replication factor C subunit 4.
   
 0.898
RFC2
Replication factor C subunit 2.
   
 0.892
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
    
 0.892
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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