STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYRM1LYR motif-containing protein 1; Belongs to the complex I LYR family. (122 aa)    
Predicted Functional Partners:
EEF2
Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...]
    
 0.732
B9D1
B9 domain-containing protein 1 isoform b.
    
 0.709
TMEM67
Transmembrane protein 67.
   
 
 0.669
B9D2
B9 domain-containing protein 2.
    
 0.652
AHI1
Abelson helper integration site 1.
    
 0.645
MKS1
Meckel syndrome type 1 protein isoform 1.
    
 0.608
ENSCJAP00000053292
Uncharacterized protein.
      
 0.593
ENTPD1
Uncharacterized protein.
    
 0.575
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.575
KIN
Kin17 DNA and RNA binding protein.
    
 0.573
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.