STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX12Syntaxin-12; Belongs to the syntaxin family. (276 aa)    
Predicted Functional Partners:
STX6
Syntaxin 6; Belongs to the syntaxin family.
    
 0.961
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.949
YKT6
Synaptobrevin homolog YKT6; Belongs to the synaptobrevin family.
   
 0.948
VAMP4
Vesicle associated membrane protein 4.
   
 0.928
STX10
Syntaxin 10; Belongs to the syntaxin family.
    
 0.925
VAMP8
Vesicle associated membrane protein 8.
   
 0.923
NAPB
NSF attachment protein beta.
    
 0.918
NAPA
NSF attachment protein alpha.
    
 0.918
STX8
Syntaxin 8.
    
 0.903
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.893
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.