STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRAMD1CGRAM domain containing 1C. (660 aa)    
Predicted Functional Partners:
GTPBP8
GTP binding protein 8 (putative).
      
 0.644
SCN2B
Sodium voltage-gated channel beta subunit 2.
    
 0.552
JAML
Uncharacterized protein.
    
 0.552
CD151
Tetraspanin.
    
   0.542
GRAMD2B
GRAM domain containing 2B.
    
 
0.536
SPICE1
Uncharacterized protein.
      
 0.536
C12orf66
Chromosome 12 open reading frame 66.
      
 0.485
TMEM211
Transmembrane protein 211.
   
  
 0.469
TMEM205
Transmembrane protein 205.
      
 0.465
TTC37
Tetratricopeptide repeat domain 37.
      
 0.463
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.