STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7IPB4_CALJARRM domain-containing protein. (293 aa)    
Predicted Functional Partners:
HNRNPC
Heterogeneous nuclear ribonucleoproteins C1/C2 isoform a.
   
   0.878
HNRNPD
Heterogeneous nuclear ribonucleoprotein D0 isoform a.
   
 
 0.783
CELF1
CUGBP Elav-like family member 1 isoform 4.
    
 
 0.779
F7HVQ5_CALJA
RRM domain-containing protein.
   
   0.768
ENSCJAP00000053270
RRM domain-containing protein.
   
   0.768
RALYL
RNA-binding Raly-like protein isoform 1.
    
   0.761
HNRNPC-2
Uncharacterized protein.
   
   0.707
ENSCJAP00000063394
Uncharacterized protein.
   
   0.707
EIF4A3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.705
HNRNPK
Heterogeneous nuclear ribonucleoprotein K isoform a.
   
 0.658
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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