STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7IJI6_CALJACABIT domain-containing protein. (259 aa)    
Predicted Functional Partners:
GRB2
Growth factor receptor-bound protein 2 isoform 1.
   
 
 0.618
XKR8
XK-related protein.
      
 0.550
SMPDL3B
Acid sphingomyelinase-like phosphodiesterase.
      
 0.549
PACSIN2
Uncharacterized protein.
      
 0.534
PCGF5
RING-type domain-containing protein.
      
 0.520
SEC63
Translocation protein SEC63 homolog.
      
 0.517
PIK3AP1
Phosphoinositide 3-kinase adapter protein 1.
   
  
 0.509
FGL2
Fibrinogen like 2.
   
  
 0.445
BATF2
Basic leucine zipper transcription factor, ATF-like 2 (Predicted).
   
  
 0.435
SASH3
SAM and SH3 domain-containing protein 3.
   
  
 0.427
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.