STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDTD-dopachrome decarboxylase. (118 aa)    
Predicted Functional Partners:
PEBP1
Phosphatidylethanolamine-binding protein 1 preproprotein.
   
 
 0.716
CMPK1
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
      
 0.707
RAB6A
Ras-related protein Rab-6A isoform b.
      
 0.610
PRDX1
Peroxiredoxin-1.
   
  
 0.573
CD74
CD74 molecule.
   
 0.564
PARK7
Protein DJ-1.
   
 
 0.537
RPS14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.450
LOC100896443
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.450
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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