STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO4C1Solute carrier organic anion transporter family member. (727 aa)    
Predicted Functional Partners:
SLC47A1
Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
    
 
 0.786
SLC22A8
Solute carrier family 22 member 8.
   
  
 0.780
SLC15A1
Solute carrier family 15 member 1.
      
 0.770
SLC22A6
Solute carrier family 22 member 6.
   
  
 0.700
SLC22A4
Solute carrier family 22 member 4.
   
  
 0.688
SLC22A5
Solute carrier family 22 member 5.
   
  
 0.679
SLC47A2
Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
    
 
 0.629
SLC15A2
Solute carrier family 15 member 2.
      
 0.620
EFCAB9
EF-hand calcium binding domain 9.
   
 
 0.587
SLC22A2
Solute carrier family 22 member 2.
   
  
 0.579
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.