STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KELKell metallo-endopeptidase (Kell blood group). (664 aa)    
Predicted Functional Partners:
EDN3
Endothelin 3.
    
 0.948
RHAG
Rh associated glycoprotein; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily.
   
  
 0.809
GYPA
Glycophorin.
   
  
 0.793
CYBB
Cytochrome b-245 beta chain.
   
 
 0.761
NOX3
NADPH oxidase 3.
   
 
 0.761
ENSCJAP00000069775
XK-related protein.
   
 
 0.626
LOC100393225
XK-related protein.
   
 
 0.626
ENSCJAP00000078021
XK-related protein.
   
 
 0.626
TRIM10
Tripartite motif containing 10.
   
    0.615
SPTA1
Spectrin alpha, erythrocytic 1.
   
  
 0.609
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.