STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCCD1RCC1 domain containing 1. (376 aa)    
Predicted Functional Partners:
F7IBW6_CALJA
Lysine demethylase 8.
    
 
 0.640
RANBP2
RAN binding protein 2.
   
 0.593
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.507
DPH3
Diphthamide biosynthesis 3.
    
 
 0.505
ADGRD1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.477
ADGRB3
Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family.
    
 0.477
ADGRB2
Adhesion G protein-coupled receptor B2; Belongs to the G-protein coupled receptor 2 family.
    
 0.477
ADGRB1
Adhesion G protein-coupled receptor B1; Belongs to the G-protein coupled receptor 2 family.
    
 0.477
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.477
RABGEF1
Rab5 GDP/GTP exchange factor.
   
 0.460
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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