Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITM2AIntegral membrane protein 2A isoform 1. (263 aa)    
Predicted Functional Partners:
APP
Amyloid beta A4 protein isoform a.
   
 0.653
TMEM130
Transmembrane protein 130 isoform a.
      
 0.605
APLP2
Amyloid-like protein 2 isoform 1.
   
 0.603
APLP1
Amyloid beta precursor like protein 1.
   
 0.603
ENSCJAP00000068083
Uncharacterized protein.
      
 0.520
PLP1
Myelin proteolipid protein isoform 1.
    
 
 0.504
ADNP2
ADNP homeobox 2.
      
 0.493
SLC35A3
Solute carrier family 35 member A3.
   
  
 0.490
HOXB6
Homeobox protein Hox-B6.
      
 0.467
ATXN2L
Ataxin-2-like protein isoform C.
      
 0.454
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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