STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPTNOptineurin. (578 aa)    
Predicted Functional Partners:
TBK1
TANK binding kinase 1.
    
 0.963
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
    
 0.913
GABARAPL1
GABA type A receptor associated protein like 1.
    
 0.913
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.911
TANK
TRAF family member-associated NF-kappa-B activator isoform a.
     
 0.905
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform 1.
    
 0.895
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.895
CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD isoform 1; Belongs to the peptidase C19 family.
    
 0.713
RAB8A
Ras-related protein Rab-8A.
     
 0.692
ENSCJAP00000067042
Uncharacterized protein.
     
 0.692
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.