STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain small subunit 1. (361 aa)    
Predicted Functional Partners:
CAPN2
Calpain 2; Belongs to the peptidase C2 family.
   
0.933
CAPN5
Calpain 5; Belongs to the peptidase C2 family.
 
 
 0.930
F7C609_CALJA
Calpain 1; Belongs to the peptidase C2 family.
   
0.916
CAST
Calpastatin.
   
 0.878
CAPN8
Calpain-8; Belongs to the peptidase C2 family.
   
0.872
CAPN6
Calpain 6; Belongs to the peptidase C2 family.
 
 
 0.868
CAPN14
Calpain 14; Belongs to the peptidase C2 family.
   
0.859
CAPN7
Calpain-7; Belongs to the peptidase C2 family.
   
 0.849
CAPN15
Calpain 15; Belongs to the peptidase C2 family.
   
 0.815
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
0.800
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.