STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USHBP1USH1 protein network component harmonin binding protein 1. (701 aa)    
Predicted Functional Partners:
MMRN2
Multimerin 2.
   
  
 0.769
MCCC2
Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial.
      
 0.698
ZBTB25
Zinc finger and BTB domain-containing protein 25.
      
 0.644
ADGRF5
Adhesion G protein-coupled receptor F5; Belongs to the G-protein coupled receptor 2 family.
  
  
 0.620
GMCL1
BTB domain-containing protein.
      
 0.605
SERTAD3
SERTA domain-containing protein 3.
    
   0.603
USH1C
USH1 protein network component harmonin.
    
 
 0.573
BTD
Biotinidase.
      
 0.565
KPNA1
Importin subunit alpha; Functions in nuclear protein import.
      
 0.549
RMDN2
Uncharacterized protein.
      
 0.549
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.