STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RRP7ARibosomal RNA-processing protein 7 homolog A. (280 aa)    
Predicted Functional Partners:
NOL6
Nucleolar protein 6.
   
 0.999
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
WDR46
WD repeat domain 46.
   
 0.997
WDR75
WD repeat domain 75.
   
 0.995
WDR43
WD repeat-containing protein 43.
   
 0.995
UTP4
UTP4 small subunit processome component.
   
 0.995
WDR36
WD repeat-containing protein 36.
   
 0.995
PDCD11
Programmed cell death 11.
   
 0.995
UTP18
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.995
PWP2
Uncharacterized protein.
   
 0.995
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.