STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOCMyocilin. (504 aa)    
Predicted Functional Partners:
WDR36
WD repeat-containing protein 36.
      
 0.916
CYP1B1
Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.
      
 0.843
LTBP2
Latent transforming growth factor beta binding protein 2.
   
 
 0.656
FBN1
Fibrillin 1.
   
 
 0.653
ASB10
Ankyrin repeat and SOCS box containing 10.
   
 
 0.633
ANGPTL7
Angiopoietin-related protein 7.
      
 0.622
OLFM3
Olfactomedin-like domain-containing protein.
    
 
0.621
SFRP1
Secreted frizzled-related protein 1.
      
 0.618
LOXL1
Lysyl oxidase homolog 1 preproprotein.
   
  
 0.591
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.577
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.