STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC1Uncharacterized protein. (456 aa)    
Predicted Functional Partners:
RAN
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.989
ADGRD1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
   
 0.948
RANBP1
RAN binding protein 1.
   
 0.934
RANBP2
RAN binding protein 2.
   
 0.923
RANBP3
RAN binding protein 3.
    
 
 0.917
KPNA4
Importin subunit alpha; Functions in nuclear protein import.
   
 
 0.913
KPNA3
Importin subunit alpha; Functions in nuclear protein import.
   
 
 0.872
RANGAP1
Ran GTPase-activating protein 1.
   
 
 0.862
ENSCJAP00000067550
RanGAP1_C domain-containing protein.
   
 
 0.837
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
      
 0.809
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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