STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf189Chromosome 1 open reading frame 189. (101 aa)    
Predicted Functional Partners:
C1orf194
Chromosome 1 open reading frame 194.
   
   0.762
TEKT2
Tektin-2.
    
   0.750
EFHB
EF-hand domain family member B.
    
   0.750
TEKT3
Tektin 3.
    
   0.750
C9orf116
Chromosome 9 open reading frame 116.
    
   0.750
CFAP52
Cilia and flagella associated protein 52.
    
   0.750
TEKT1
Tektin-1.
    
   0.750
RIBC2
RIB43A domain with coiled-coils 2.
    
   0.750
C9orf135
Chromosome 9 open reading frame 135.
    
   0.750
PACRG
Parkin coregulated.
    
   0.750
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.