STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP3TrmE-type G domain-containing protein. (523 aa)    
Predicted Functional Partners:
MTO1
Mitochondrial tRNA translation optimization 1.
 0.982
GTPBP8
GTP binding protein 8 (putative).
    
 
 0.941
ERGIC1
Endoplasmic reticulum-Golgi intermediate compartment protein 1.
  
 0.939
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3 isoform a.
  
 0.939
ERGIC2
Endoplasmic reticulum-Golgi intermediate compartment protein 2.
  
 0.939
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
  
 0.921
MRPL11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.909
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.893
MRM3
Mitochondrial rRNA methyltransferase 3.
   
 
 0.888
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.849
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.