STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE4Spectrin repeat containing nuclear envelope family member 4. (405 aa)    
Predicted Functional Partners:
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.921
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.920
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
     
0.720
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
     
 0.707
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
     
0.702
CCDC155
Coiled-coil domain containing 155.
     
 0.693
PLEC
Plectin.
      
 0.684
KIF5B
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.580
SUN5
Sad1 and UNC84 domain containing 5.
    
 
 0.486
SPAG4
Sperm associated antigen 4.
    
 
 0.484
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.