STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE4Spectrin repeat containing nuclear envelope family member 4. (405 aa)    
Predicted Functional Partners:
TRAK1
Trafficking kinesin protein 1.
      
 0.918
MAP7
Microtubule associated protein 7.
      
 0.918
KLC2
Kinesin light chain 2 isoform 1.
    
 
 0.914
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.900
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.845
SYNE1
Spectrin repeat containing nuclear envelope protein 1.
    
0.775
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
0.770
CCDC155
Coiled-coil domain containing 155.
    
 0.751
KLC1
Uncharacterized protein.
    
 
 0.749
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.743
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.