STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS35LVPS35 endosomal protein sorting factor like. (963 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain-containing protein 22.
   
 
 0.967
CCDC93
Coiled-coil domain containing 93.
   
 
 0.961
FAM45A
DENN domain containing 10.
    
 
 0.952
COMMD2
COMM domain-containing protein 2.
    
 
 0.947
COMMD8
COMM domain containing 8.
    
 
 0.946
VPS29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.943
VPS26C
VPS26 endosomal protein sorting factor C.
   
 
 0.942
COMMD6
COMM domain-containing protein 6 isoform b.
    
 
 0.931
COMMD10
COMM domain-containing protein 10.
    
 
 0.917
COMMD1
COMM domain-containing protein 1.
    
 
 0.870
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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