Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALKBH6Putative alpha-ketoglutarate-dependent dioxygenase ABH6 isoform 2. (266 aa)    
Predicted Functional Partners:
MED29
Mediator complex subunit 29.
    
 
 0.804
ALKBH1
Alkylated DNA repair protein alkB homolog 1.
   
  
 0.737
ALKBH7
AlkB homolog 7.
   
  
 0.660
ALKBH4
AlkB homolog 4, lysine demethylase.
      
 0.621
RSU1
Ras suppressor protein 1 isoform 1.
      
 0.617
VPS51
VPS51 subunit of GARP complex.
      
 0.600
ALKBH2
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 isoform 1.
      
 0.582
DHX30
Uncharacterized protein.
      
 0.557
PCYOX1
Prenylcysteine oxidase 1.
      
 0.554
ADI1
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Also down-regulates cell migration mediated by MMP14. Belongs to the acireductone dioxygenase (ARD) family.
      
 0.550
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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