STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL33Kelch like family member 33. (797 aa)    
Predicted Functional Partners:
NT5C1A
5'-nucleotidase, cytosolic IA.
   
  
 0.580
CUL3
Cullin-3 isoform 1; Belongs to the cullin family.
    
 0.527
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.479
CACUL1
CDK2-associated and cullin domain-containing protein 1; Belongs to the cullin family.
    
 0.479
PM20D2
Peptidase M20 domain containing 2.
      
 0.476
UBR3
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.453
TRIM55
Tripartite motif containing 55.
   
  
 0.435
USP28
Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.
   
  
 0.406
NT5C1B
Uncharacterized protein.
   
  
 0.401
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.