STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX5T-box transcription factor TBX5 isoform 1. (518 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
   
 
 0.977
GATA4
GATA binding protein 4.
   
 
 0.935
HAND2
Heart and neural crest derivatives expressed 2.
   
 0.856
MEF2C
Myocyte-specific enhancer factor 2C isoform 3.
    
 
 0.855
YAP1
Yes associated protein 1.
    
 0.847
WWTR1
WW domain-containing protein.
    
 0.787
CTNNB1
Catenin beta 1.
    
 0.694
GATA5
GATA binding protein 5.
   
 
 0.689
ISL1
Insulin gene enhancer protein ISL-1.
    
 0.676
SMARCD3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.
    
 
 0.657
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.