STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAND1Heart and neural crest derivatives expressed 1. (224 aa)    
Predicted Functional Partners:
NKX2-5
NK2 homeobox 5.
    
 0.765
TCF3
Transcription factor 3.
   
 0.724
HNF1B
HNF1 homeobox B.
     
 0.710
GATA4
GATA binding protein 4.
   
 0.702
FOXP4
Forkhead box protein P4 isoform 1.
      
 0.674
GATA6
GATA binding protein 6.
   
 0.605
HAND2
Heart and neural crest derivatives expressed 2.
   
   0.602
TCF4
Transcription factor 4.
   
 0.525
TCF12
Transcription factor 12 isoform a.
   
 0.525
TBX20
T-box transcription factor 20.
     
 0.491
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.