Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DNAL1Dynein axonemal light chain 1. (190 aa)    
Predicted Functional Partners:
SOD1
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family.
     
 0.901
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.793
DNAH5
Dynein axonemal heavy chain 5.
   
 
 0.788
CCDC114
Coiled-coil domain-containing protein 114 isoform 2.
   
 
 0.736
DNAI1
Dynein axonemal intermediate chain 1.
   
 
 0.736
CCDC151
Coiled-coil domain containing 151.
    
 0.730
MNS1
Meiosis-specific nuclear structural protein 1.
    
 0.730
CCDC39
Coiled-coil domain containing 39.
    
 0.725
DNAI2
Dynein axonemal intermediate chain 2.
    
 
 0.724
RIBC2
RIB43A domain with coiled-coils 2.
    
 0.724
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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