STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GORABGolgin, RAB6 interacting. (392 aa)    
Predicted Functional Partners:
SCYL1
SCY1 like pseudokinase 1.
   
 
 0.695
RCHY1
RING finger and CHY zinc finger domain-containing protein 1 isoform 1.
    
 
 0.646
PDIK1L
Serine/threonine-protein kinase PDIK1L; Belongs to the protein kinase superfamily.
      
 0.493
SUCNR1
Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.489
PYCR1
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
      
 0.463
SCYL3
Protein-associating with the carboxyl-terminal domain of ezrin isoform 2.
   
 
 0.460
ARF5
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.439
RAB6B
Uncharacterized protein.
    
 
 0.415
RAB6A
Ras-related protein Rab-6A isoform b.
    
 
 0.415
RAB41
Uncharacterized protein.
    
 
 0.401
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.