Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RGP1Retrograde Golgi transport protein RGP1 homolog. (391 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.990
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.801
RAB6B
Uncharacterized protein.
    
 0.778
RAB6A
Ras-related protein Rab-6A isoform b.
    
 0.778
RAB41
Uncharacterized protein.
    
 0.778
RAB33B
Ras-related protein Rab-33B.
    
 0.731
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.722
RAB36
RAB36, member RAS oncogene family.
    
 0.701
RAB34
RAB34, member RAS oncogene family.
    
 0.701
ARFRP1
ADP-ribosylation factor-related protein 1 isoform a.
    
  0.699
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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