STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCSAMUncharacterized protein. (179 aa)    
Predicted Functional Partners:
CLNK
Cytokine dependent hematopoietic cell linker.
   
  
 0.609
SNX22
Sorting nexin 22.
      
 0.585
STX3
Syntaxin 3; Belongs to the syntaxin family.
      
 0.563
ARHGAP22
Rho GTPase activating protein 22.
      
 0.561
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.524
BOD1L1
Biorientation of chromosomes in cell division 1 like 1.
      
 0.513
RAB7B
Uncharacterized protein.
      
 0.513
MARCKSL1
MARCKS-related protein.
      
 0.461
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.458
MPHOSPH9
M-phase phosphoprotein 9.
      
 0.449
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.