STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNB1IP1E3 ubiquitin-protein ligase CCNB1IP1. (277 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
      
 0.646
MSH4
MutS homolog 4.
      
 0.644
MLH1
MutL homolog 1.
      
 0.563
MLH3
MutL homolog 3.
      
 0.562
MUS81
MUS81 structure-specific endonuclease subunit.
      
 0.549
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.522
TEX11
Testis expressed 11.
      
 0.516
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.473
PRIM2
DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.
      
 0.470
SMC3
Structural maintenance of chromosomes protein.
      
 0.456
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.