STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH3G-patch domain containing 3. (529 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
   
    0.923
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.595
RSPRY1
RING finger and SPRY domain-containing protein 1.
      
 0.591
EAF1
ELL associated factor 1.
      
 0.582
SNX20
Sorting nexin 20.
      
 0.568
EDC3
Enhancer of mRNA-decapping protein 3.
   
  
 0.558
ZNRF2
Zinc and ring finger 2.
      
 0.541
DDX50
ATP-dependent RNA helicase DDX50.
   
  
 0.504
C7orf41
Maturin, neural progenitor differentiation regulator homolog.
      
 0.501
BRD7
Bromodomain containing 7.
      
 0.492
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.