STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLHC1Clathrin heavy chain linker domain-containing protein 1. (587 aa)    
Predicted Functional Partners:
ENSCJAP00000067149
Uncharacterized protein.
   
 0.999
ENSCJAP00000069046
J domain-containing protein.
   
 0.999
DNAJC6
Putative tyrosine-protein phosphatase auxilin isoform 1.
   
 0.996
ITSN2
Intersectin 2.
   
 0.974
ENSCJAP00000078263
Uncharacterized protein.
   
 0.974
ITSN1
Intersectin 1.
    
 0.964
CLTA
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.870
CLTB
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.870
GAS7
Growth arrest-specific protein 7 isoform c.
   
 0.830
SORL1
Sortilin related receptor 1.
    
 0.822
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.