STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRD3Bromodomain-containing protein 3. (723 aa)    
Predicted Functional Partners:
BRD4
Bromodomain containing 4.
   
 
 0.949
BRD2
Uncharacterized protein.
   
 
 0.865
F7IMR7_CALJA
Uncharacterized protein.
   
 
 0.865
ENSCJAP00000069733
Uncharacterized protein.
   
 
 0.865
SPOP
Speckle type BTB/POZ protein.
    
 
 0.793
DMAP1
DNA methyltransferase 1 associated protein 1.
    
 
 0.764
CHD4
Chromodomain-helicase-DNA-binding protein 4.
   
 
 0.749
NSD3
Histone-lysine N-methyltransferase NSD3 isoform long.
   
 0.741
PIP4K2C
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform a.
    
   0.730
TAF8
Transcription initiation factor TFIID subunit 8.
    
 
 0.691
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.