STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf112Chromosome 1 open reading frame 112. (968 aa)    
Predicted Functional Partners:
PARPBP
PARP1 binding protein.
   
  
 0.596
EXO1
Exonuclease 1.
   
  
 0.543
KNTC1
Kinetochore associated 1.
   
  
 0.535
ZFYVE28
Zinc finger FYVE-type containing 28.
      
 0.524
EGFLAM
EGF like, fibronectin type III and laminin G domains.
      
 0.497
TRIP13
Thyroid hormone receptor interactor 13; Belongs to the AAA ATPase family.
   
   0.491
ZWILCH
Zwilch kinetochore protein.
   
    0.487
CABIN1
Calcineurin binding protein 1.
      
 0.469
CCDC181
Coiled-coil domain containing 181.
      
 0.465
MCM8
MCM domain-containing protein; Belongs to the MCM family.
   
  
 0.435
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.