STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPATNuclear protein, coactivator of histone transcription. (1423 aa)    
Predicted Functional Partners:
CSTF1
Cleavage stimulation factor subunit 1.
      
 0.770
HCCS
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
    
 
 0.594
MAPRE3
Microtubule-associated protein RP/EB family member 3.
    
 
 0.591
TRAPPC3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
     
 0.584
IQCB1
IQ motif containing B1.
   
 
 0.580
CDK2
Cyclin dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.578
CASP8AP2
Caspase 8 associated protein 2.
   
 
 0.576
PPP5C
Serine/threonine-protein phosphatase.
    
 
 0.571
RETREG3
Reticulophagy regulator family member 3.
    
 
 0.569
ENOX1
Ecto-NOX disulfide-thiol exchanger 1.
      
 0.564
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.